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EDP01844 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01844" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01844Predicted protein (890 aa)    
Predicted Functional Partners:
VPS52
Subunit of GARP complex (657 aa)
     
  0.989
VPS53
Subunit of GARP complex (1033 aa)
     
  0.981
SYP6
Qc-SNARE protein, Tlg1/Syntaxin 6-family (225 aa)
     
  0.949
SYP5
Qc-SNARE protein, Syn8/Syntaxin8-family (243 aa)
       
  0.947
EDP05767
Predicted protein (912 aa)
     
 
  0.899
VTI1
Qb-SNARE protein, VTI1-family (223 aa)
     
    0.833
EDP07644
Predicted protein (313 aa)
     
 
  0.807
EDP08847
Predicted protein (1305 aa)
     
   
  0.740
COG7
Component of oligomeric golgi complex 7 (758 aa)
     
 
  0.710
VPS35
Subunit of retromer complex (739 aa)
     
   
  0.703
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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