STRINGSTRING
EDP01858 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01858" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01858Predicted protein (397 aa)    
Predicted Functional Partners:
EDO98238
Predicted protein (66 aa)
     
        0.479
EDP03997
Predicted protein (383 aa)
     
        0.475
EDO96882
Predicted protein (1826 aa)
     
        0.422
EDP00682
Transcription initiation factor TFIID, subunit TAF5 (522 aa)
     
        0.420
EDO96676
Predicted protein (283 aa)
     
        0.420
MFT12
Major facilitator superfamily transporter (336 aa)
     
        0.412
ABH1
mRNA cap-binding protein (1134 aa)
     
        0.412
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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