STRINGSTRING
EDP01956 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01956" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01956Predicted protein (646 aa)    
Predicted Functional Partners:
EDO96138
Predicted protein (226 aa)
     
     
0.720
EDP01955
Predicted protein (354 aa)
     
     
0.690
EDP08015
Predicted protein (639 aa)
     
        0.663
EDP01855
Predicted protein (178 aa)
     
        0.659
PTA4
Proton/phosphate symporter (556 aa)
     
        0.658
EDP02514
Predicted protein (229 aa)
     
        0.558
EDP06539
Predicted protein (596 aa)
     
        0.519
ERM3
ERD4-related membrane protein (1868 aa)
     
        0.475
psbT
Photosystem II reaction center protein T; Seems to play a role in the dimerization of PSII (By similarity). Essential to maintain photosynthetic activity under adverse growth conditions (31 aa)
     
        0.402
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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