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EDP01960 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01960" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01960Predicted protein (257 aa)    
Predicted Functional Partners:
VPS18
Subunit of the VPS-C complex (1029 aa)
     
        0.502
VPS11
Subunit of VPS-C complex (1102 aa)
     
        0.477
EDP04348
Predicted protein (772 aa)
     
        0.475
SET3
Histone methyltransferase (957 aa)
     
        0.425
EDP01862
Predicted protein (202 aa)
     
        0.417
EDP07947
Predicted protein (356 aa)
     
        0.407
EDP04950
Predicted protein (382 aa)
     
        0.406
EDP06172
Predicted protein (325 aa)
     
        0.404
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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