STRINGSTRING
EDP01980 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01980" - Glycosyl transferase, group 1 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01980Glycosyl transferase, group 1 (1395 aa)    
Predicted Functional Partners:
EDP01963
Predicted protein (648 aa)
     
        0.632
EDP05167
Predicted protein (1378 aa)
     
        0.600
EDP09043
Predicted protein (1130 aa)
     
        0.594
EDP03152
Predicted protein (419 aa)
     
        0.584
EDP02651
Predicted protein (516 aa)
     
        0.581
EDP08817
Predicted protein (796 aa)
     
        0.535
EDP07999
Predicted protein (540 aa)
     
        0.529
EDO96335
Predicted protein (540 aa)
     
        0.523
EDP09315
High mobility group protein (552 aa)
     
        0.519
EDO96636
Predicted protein (626 aa)
     
        0.516
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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