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EDP01981 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP01981" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01981Predicted protein (110 aa)    
Predicted Functional Partners:
EDP03322
Predicted protein (811 aa)
     
  0.969
SMP12
U1 small nuclear ribonucleoprotein (394 aa)
     
  0.966
SPL8
U2 snRNP auxiliary factor, large subunit (306 aa)
     
  0.959
EDP06779
U2 snRNP auxiliary factor, large subunit (309 aa)
     
  0.957
EDO99010
Predicted protein (80 aa)
     
  0.957
PRP17
Nuclear pre-mRNA splicing factor, component of the spliceosome (313 aa)
     
  0.953
WWP1
WW domain protein (746 aa)
     
  0.950
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
  0.949
SPL2
Splicing factor 3a, subunit 2 (287 aa)
     
  0.913
EDO99837
RNA binding protein (316 aa)
     
  0.899
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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