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UBC4 protein (Chlamydomonas reinhardtii) - STRING interaction network
"UBC4" - E2 ubiquitin-conjugating-like enzyme in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBC4E2 ubiquitin-conjugating-like enzyme (159 aa)    
Predicted Functional Partners:
EDP01119
Predicted protein (97 aa)
     
  0.992
EDP01120
Ubiquitin-like protein (94 aa)
     
  0.991
STM2
Ubiquitin-like protein (148 aa)
     
  0.991
EDO98075
Predicted protein (79 aa)
     
  0.991
EDP00184
Predicted protein (400 aa)
     
  0.978
EDP00317
RAN GTPase activating protein, RANGAP1 (498 aa)
     
  0.965
EDP00209
Predicted protein (454 aa)
     
  0.965
PCN1
PCNA proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
     
  0.960
UBC1
Ubiquitin activating enzyme E1 (411 aa)
       
  0.947
UBA1
Ubiquitin-activating enzyme E1 (1061 aa)
     
  0.943
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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