STRINGSTRING
EDP02005 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP02005" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP02005Predicted protein (379 aa)    
Predicted Functional Partners:
EDP04747
Predicted protein (847 aa)
     
        0.627
EDP01396
Predicted protein (76 aa)
     
        0.552
EDP07866
Predicted protein (1273 aa)
     
        0.543
EDP04748
Predicted protein (1044 aa)
     
        0.524
EDP09511
Predicted protein (923 aa)
     
        0.518
EDP06171
Predicted protein (930 aa)
     
        0.515
EDO99084
Predicted protein (292 aa)
     
        0.510
EDO96199
Predicted protein (761 aa)
     
        0.503
EDP01395
Predicted protein (1112 aa)
     
        0.501
MMP13
Matrix metalloproteinase-like protein (756 aa)
     
        0.495
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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