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GDIC1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"GDIC1" - Rab GDP dissociation inhibitor protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDIC1Rab GDP dissociation inhibitor protein (442 aa)    
Predicted Functional Partners:
RABL2A
Small rab-related GTPase (229 aa)
     
  0.968
RABA1
Small rab-related GTPase (216 aa)
     
  0.967
RABE1
Small rab-related GTPase (218 aa)
     
 
  0.961
RABH1
Small rab-related GTPase (211 aa)
     
 
  0.958
RABD1
Small rab-related GTPase (203 aa)
     
 
  0.957
RABG1
Small rab-related GTPase (206 aa)
     
 
  0.932
RABF1
Small rab-related GTPase (202 aa)
     
 
  0.888
EDP03863
Predicted protein (341 aa)
     
  0.874
EDP09538
Predicted protein (338 aa)
     
  0.856
FAP156
Small rab-related GTPase; Small GTPase-like component of the intraflagellar transport (IFT) complex B. Forms a subcomplex within the IFT complex B with IFT25. Has very low GTPase activity either because it lacks the conserved catalytic Gln in position 79 or because it requires some GTPase-activating protein (GAP) for GTP turnover (204 aa)
       
      0.837
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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