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PCK1a protein (Chlamydomonas reinhardtii) - STRING interaction network
"PCK1a" - Phosphoenolpyruvate carboxykinase, splice variant in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCK1aPhosphoenolpyruvate carboxykinase, splice variant (610 aa)    
Predicted Functional Partners:
MDH1
Malate dehydrogenase (355 aa)
     
 
  0.964
MDH2
Malate dehydrogenase (353 aa)
     
 
  0.964
MDH4
Malate dehydrogenase (373 aa)
     
 
  0.963
CIS2
Citrate synthase (496 aa)
     
 
  0.962
MDH3
NAD-dependent malate dehydrogenase (302 aa)
     
 
  0.957
MDH5
NADP-Malate dehydrogenase (415 aa)
     
 
  0.957
PGH1
Enolase (477 aa)
     
 
  0.951
MAS1
Malate synthase (546 aa)
   
 
  0.951
ACLB1
ATP citrate lyase, subunit B (534 aa)
     
 
  0.950
PYK6-5
Pyruvate kinase (154 aa)
   
 
  0.939
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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