STRINGSTRING
EDP02117 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP02117" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP02117Predicted protein (160 aa)    
Predicted Functional Partners:
EDP01120
Ubiquitin-like protein (94 aa)
       
  0.832
EDP01119
Predicted protein (97 aa)
       
  0.832
STM2
Ubiquitin-like protein (148 aa)
       
  0.832
EDO98075
Predicted protein (79 aa)
       
  0.832
UBC2
Ubiquitin-conjugating enzyme E2 (139 aa)
     
  0.816
RBX1
Ring-box protein (130 aa)
       
  0.813
RPL40
Ribosomal protein L40 (128 aa)
       
  0.783
SKP1
E3 ubiquitin ligase (157 aa)
     
  0.772
APG7
Autophagy protein (605 aa)
     
  0.766
EDP00184
Predicted protein (400 aa)
       
  0.761
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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