STRINGSTRING
EDP02132 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP02132" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP02132Predicted protein (750 aa)    
Predicted Functional Partners:
EDO97327
Predicted protein (403 aa)
   
 
  0.968
EDP06926
Predicted protein (796 aa)
   
 
  0.944
EDO97326
Predicted protein (246 aa)
   
 
  0.922
EDP06649
Predicted protein (353 aa)
   
 
  0.920
EDP08175
Predicted protein (688 aa)
   
 
  0.887
SHKD1
Dehydroquinate dehydratase (554 aa)
   
 
  0.886
EDO99518
Predicted protein (1177 aa)
   
 
  0.840
EDP01101
Predicted protein (879 aa)
   
   
 
0.816
EDO98975
Predicted protein (253 aa)
   
 
  0.809
EIF5Ba
Eukaryotic initiation factor (1651 aa)
   
 
  0.808
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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