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LCI8 protein (Chlamydomonas reinhardtii) - STRING interaction network
"LCI8" - N-acetylglutamate synthase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCI8N-acetylglutamate synthase (611 aa)    
Predicted Functional Partners:
AGS1
Argininosuccinate synthase (441 aa)
   
 
  0.994
OTC1
Ornithine carbamoyltransferase (364 aa)
   
 
  0.986
ARG9
Acetylornithine aminotransferase (460 aa)
 
 
  0.978
ARG7
Argininosuccinate lyase (219 aa)
   
 
  0.977
EDO98751
N-acetylglutamate synthase (414 aa)
 
 
  0.976
AGK1
Acetylglutamate kinase-like protein (340 aa)
 
 
0.974
EDP01497
N-acetyl-gamma-glutamyl-phosphate reductase (383 aa)
 
 
  0.970
GLB1
Nitrogen regulatory protein PII (205 aa)
   
 
  0.949
OTA1
Ornithine transaminase (446 aa)
   
 
  0.946
GDH1
Glutamate dehydrogenase (448 aa)
         
  0.939
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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