STRINGSTRING
NIFS1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"NIFS1" - Cysteine desulfurase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIFS1Cysteine desulfurase (468 aa)    
Predicted Functional Partners:
ISU1
Iron-sulfur cluster assembly scaffold protein; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (163 aa)
 
  0.995
FTX1
Frataxin (217 aa)
     
  0.979
EDO99985
Predicted protein (404 aa)
   
  0.949
MFDX1
Ferredoxin, adrenodoxin-like protein (171 aa)
 
  0.915
TST
Thiosulfate sulfurtransferase (310 aa)
   
  0.886
NIFU2
Iron-sulfur cluster assembly protein (319 aa)
   
  0.854
NIFU3
Iron-sulfur cluster assembly protein (489 aa)
   
  0.848
NIFU1
Iron-sulfur cluster assembly protein (154 aa)
   
  0.848
NIFS2
Cysteine desulfurase (356 aa)
   
   
 
0.817
FDX4
Apoferredoxin (131 aa)
   
  0.806
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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