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AST1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"AST1" - Aspartate aminotransferase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AST1Aspartate aminotransferase (433 aa)    
Predicted Functional Partners:
MDH2
Malate dehydrogenase (353 aa)
     
  0.974
MDH1
Malate dehydrogenase (355 aa)
     
  0.974
MDH4
Malate dehydrogenase (373 aa)
     
  0.972
MDH3
NAD-dependent malate dehydrogenase (302 aa)
     
  0.970
MDH5
NADP-Malate dehydrogenase (415 aa)
     
  0.970
EDO97202
Asparagine synthase (578 aa)
     
 
  0.951
EDO95942
Predicted protein (256 aa)
     
 
  0.951
GDH1
Glutamate dehydrogenase (448 aa)
     
  0.950
GDH2
Glutamate dehydrogenase (450 aa)
     
  0.950
TST
Thiosulfate sulfurtransferase (310 aa)
       
  0.945
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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