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EDP02246 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP02246" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP02246Predicted protein (1150 aa)    
Predicted Functional Partners:
EDO96539
Ankyrin-repeat protein (749 aa)
     
        0.664
EDO96254
Predicted protein (820 aa)
     
        0.652
EDP05608
Predicted protein (700 aa)
     
        0.648
USE1
Qc-SNARE protein, USE1 family (482 aa)
     
        0.636
EDP00842
Predicted protein (463 aa)
     
        0.597
EDP03259
Predicted protein (469 aa)
     
        0.576
EDP04430
Predicted protein (123 aa)
     
        0.571
EDO97166
Predicted protein (1125 aa)
     
        0.553
PRFA2
Hypothetical protein (336 aa)
     
        0.524
AGO3
Argonaute-like protein (1037 aa)
     
        0.520
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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