STRINGSTRING
EDP02278 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP02278" - TAP42-like protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP02278TAP42-like protein (423 aa)    
Predicted Functional Partners:
PSN1
Presenilin protease; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors (577 aa)
           
  0.807
CUL2
Cullin (782 aa)
           
  0.608
CUL3
Cullin (744 aa)
           
  0.578
EDP03829
Predicted protein (481 aa)
     
        0.478
SRP68
Subunit of the signal recognition particle (699 aa)
     
        0.475
EDO96850
Predicted protein (786 aa)
     
        0.475
RSP3
Radial spoke protein 3 (516 aa)
           
  0.467
EDP06317
Predicted protein (1084 aa)
     
        0.428
SEC13L
COP-II coat subunit, nucleoporin (338 aa)
     
        0.412
MRPS7
Mitochondrial ribosomal protein S7 (232 aa)
     
        0.406
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (8%) [HD]