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HCP2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"HCP2" - Hybrid-cluster protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCP2Hybrid-cluster protein (654 aa)    
Predicted Functional Partners:
PRF1
Pyruvate-ferredoxin oxidoreductase (1181 aa)
         
  0.713
CGL78
Predicted protein (207 aa)
           
  0.712
PHC4
Cell wall protein pherophorin-C4 (493 aa)
           
  0.711
PHC5
Cell wall protein pherophorin-C5 (176 aa)
           
  0.711
PHC6
Cell wall protein pherophorin-C6 (211 aa)
           
  0.710
HYDG
Hydrogenase assembly factor (567 aa)
     
   
  0.634
PHC1
Cell wall protein pherophorin-C1 (479 aa)
           
  0.588
HYDEF
Iron hydrogenase assembly protein (1151 aa)
     
   
  0.572
HYD1
Iron hydrogenase (497 aa)
     
 
  0.527
EDP09146
Predicted protein (1572 aa)
     
        0.503
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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