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LCI9 protein (Chlamydomonas reinhardtii) - STRING interaction network
"LCI9" - low-CO2-inducible protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCI9low-CO2-inducible protein (590 aa)    
Predicted Functional Partners:
LCI8
N-acetylglutamate synthase (611 aa)
     
   
  0.533
LCI24
low-CO2-inducible membrane protein (176 aa)
           
  0.493
LCI26
low-CO2-induced U-box protein (563 aa)
           
  0.493
LCI13
low-CO2-inducible protein (153 aa)
           
  0.493
EDP03225
Lipopolysaccharide-modifying enzyme (501 aa)
           
  0.478
EDO99295
Lipopolysaccharide-modifying enzyme (487 aa)
           
  0.478
LCI15
PRLI-interacting factor L (316 aa)
           
  0.477
LCI11
low-CO2-inducible membrane protein (250 aa)
           
  0.477
LCI22
low-CO2-inducible protein (122 aa)
           
  0.477
ELI2-1
Early light-inducible protein (175 aa)
           
  0.476
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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