STRINGSTRING
LCI28 protein (Chlamydomonas reinhardtii) - STRING interaction network
"LCI28" - Low CO2-induced aldose reductase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCI28Low CO2-induced aldose reductase (354 aa)    
Predicted Functional Partners:
EDO98866
Predicted protein (476 aa)
   
 
  0.769
ADH1
Dual function alcohol dehydrogenase / acetaldehyde dehydrogenase (954 aa)
   
 
  0.769
EDP07188
Predicted protein (475 aa)
     
        0.713
EDP06659
Predicted protein (58 aa)
     
        0.706
EDP07125
Predicted protein (409 aa)
     
        0.702
EDO96040
Predicted protein (246 aa)
     
        0.688
EDO99556
Predicted protein (1601 aa)
     
        0.687
EDP02975
Predicted protein (438 aa)
     
        0.685
HSP22C
Heat shock protein 22C (291 aa)
     
        0.682
EDP09362
Predicted protein (141 aa)
     
        0.672
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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