STRINGSTRING
PHC20 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PHC20" - Cell wall protein pherophorin-C20 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHC20Cell wall protein pherophorin-C20 (216 aa)    
Predicted Functional Partners:
GAS30
Hydroxyproline-rich glycoprotein, stress-induced (472 aa)
     
     
0.720
EDP01436
Predicted protein (168 aa)
     
        0.704
EDP02425
Predicted protein (446 aa)
     
        0.673
EDP00555
Predicted protein (185 aa)
     
        0.666
EDP00667
Predicted protein (237 aa)
     
        0.665
EDO99917
Predicted protein (483 aa)
     
        0.632
EDO98483
Predicted protein (1586 aa)
     
        0.525
EDP08504
Predicted protein (87 aa)
     
        0.481
EDP09316
Predicted protein (86 aa)
     
        0.428
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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