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HCP4 protein (Chlamydomonas reinhardtii) - STRING interaction network
"HCP4" - Hybrid-cluster protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCP4Hybrid-cluster protein (646 aa)    
Predicted Functional Partners:
HCP1
Hybrid-cluster protein (644 aa)
   
   
0.705
HCP3
Hybrid-cluster protein (649 aa)
   
   
0.703
PRF1
Pyruvate-ferredoxin oxidoreductase (1181 aa)
         
  0.626
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
         
  0.547
HYDEF
Iron hydrogenase assembly protein (1151 aa)
     
   
  0.516
HYD1
Iron hydrogenase (497 aa)
         
  0.478
GSF1
Ferredoxin-dependent glutamate synthase (1552 aa)
         
  0.475
MDAR1
Monodehydroascorbate reductase (435 aa)
       
  0.470
EDP08466
NADH oxidase (600 aa)
       
  0.469
PAT2
Phosphate acetyltransferase (792 aa)
           
  0.467
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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