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EDP02454 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP02454" - Glycine-rich RNA-binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP02454Glycine-rich RNA-binding protein (165 aa)    
Predicted Functional Partners:
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
  0.951
SPL8
U2 snRNP auxiliary factor, large subunit (306 aa)
   
  0.946
XAB2
Transcription-coupled DNA repair protein (886 aa)
       
  0.938
EDO99010
Predicted protein (80 aa)
   
  0.933
SMP1
Small nuclear ribonucleoprotein (127 aa)
     
  0.928
EDP09509
Predicted protein (494 aa)
     
  0.926
PRP17
Nuclear pre-mRNA splicing factor, component of the spliceosome (313 aa)
       
  0.922
EDP03322
Predicted protein (811 aa)
     
  0.922
SMP9
Small nuclear ribonucleoprotein Sm D1 (114 aa)
     
  0.921
EDP08691
Predicted protein (233 aa)
     
  0.921
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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