STRINGSTRING
EDP02462 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP02462" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP02462Predicted protein (860 aa)    
Predicted Functional Partners:
EDP09724
Predicted protein (830 aa)
     
        0.676
RET1
Predicted protein (1029 aa)
     
        0.659
EDO98845
Predicted protein (471 aa)
     
        0.659
EDP04578
Predicted protein (496 aa)
     
        0.656
CGL65
Predicted protein (253 aa)
     
        0.651
EDP07749
Predicted protein (175 aa)
     
        0.632
EDP00878
Predicted protein (371 aa)
     
        0.597
EDO96983
Predicted protein (1018 aa)
     
        0.574
EDO99866
Predicted protein (382 aa)
     
        0.555
PUS1
tRNA pseudouridine synthase (382 aa)
     
        0.547
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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