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AP1S1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"AP1S1" - Sigma1-Adaptin in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AP1S1Sigma1-Adaptin (158 aa)    
Predicted Functional Partners:
AP1M1
Mu1-Adaptin (425 aa)
     
  0.983
AP1G1
Gamma-adaptin (850 aa)
     
  0.983
AP4B4
Beta-4-adaptin (858 aa)
     
  0.979
AP4E1
Epsilon-adaptin (925 aa)
     
  0.976
AP1B1
Hypothetical protein (186 aa)
     
  0.969
AP2A1
Alpha-adaptin (953 aa)
     
  0.919
COPB1
Beta-cop; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (959 aa)
     
  0.896
AP2M2
Mu2-Adaptin (438 aa)
     
  0.895
ARL1
ARF-like small GTPase (181 aa)
     
  0.809
ARL5
Small ARF-related GTPase (182 aa)
     
  0.806
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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