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RABC1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RABC1" - Small rab-related GTPase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABC1Small rab-related GTPase (229 aa)    
Predicted Functional Partners:
VPS37
Subunit of the ESCRT-I complex (342 aa)
     
      0.670
RABH1
Small rab-related GTPase (211 aa)
   
 
0.631
VPS28
Subunit of the ESCRT-I complex (225 aa)
       
      0.554
DHC9
Dynein heavy chain 9 (2612 aa)
     
 
    0.548
FAP156
Small rab-related GTPase; Small GTPase-like component of the intraflagellar transport (IFT) complex B. Forms a subcomplex within the IFT complex B with IFT25. Has very low GTPase activity either because it lacks the conserved catalytic Gln in position 79 or because it requires some GTPase-activating protein (GAP) for GTP turnover (204 aa)
   
          0.478
EDP09538
Predicted protein (338 aa)
     
   
  0.454
VCL1
VPS16-like protein (849 aa)
     
   
  0.402
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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