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FAD5A protein (Chlamydomonas reinhardtii) - STRING interaction network
"FAD5A" - MGDG specific palmitate delta-7 desaturase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAD5AMGDG specific palmitate delta-7 desaturase (306 aa)    
Predicted Functional Partners:
FAB2
Plastid acyl-ACP desaturase (401 aa)
     
 
  0.825
EDP03682
delta-9-ACP desaturase-like protein (148 aa)
         
    0.800
DES6
omega-6-FAD, chloroplast isoform (424 aa)
 
   
  0.772
EDP05180
Predicted protein (346 aa)
       
 
  0.751
EDP02056
Predicted protein (324 aa)
       
 
  0.751
BCC1
Acetyl-coa biotin carboxyl carrier (228 aa)
     
   
  0.728
EDP02614
Predicted protein (132 aa)
     
     
0.699
LIPG1
Carboxylic ester hydrolase/lipase (390 aa)
           
  0.689
NIT1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (882 aa)
   
 
  0.595
CFA1
Cyclopropane fatty acid synthase (1151 aa)
   
        0.573
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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