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TRP5 protein (Chlamydomonas reinhardtii) - STRING interaction network
"TRP5" - Transient receptor potential ion channel protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRP5Transient receptor potential ion channel protein (1794 aa)    
Predicted Functional Partners:
EDP02515
Predicted protein (244 aa)
     
        0.711
EDP01847
Speract/scavenger receptor, transmembrane glycoprotein (214 aa)
     
        0.671
EDP02512
Predicted protein (683 aa)
     
        0.663
EDP01846
Predicted protein (359 aa)
     
        0.652
EDP02627
Hypothetical protein (205 aa)
     
        0.524
FAP199
Flagellar associated protein (1366 aa)
     
        0.521
EDP02514
Predicted protein (229 aa)
     
        0.519
EDO95768
Predicted protein (123 aa)
     
        0.511
EDP01848
Predicted protein (89 aa)
     
        0.507
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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