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AMYA1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"AMYA1" - Alpha-amylase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMYA1Alpha-amylase (408 aa)    
Predicted Functional Partners:
PHOB
Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (1010 aa)
   
  0.979
PHOA
Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (872 aa)
   
  0.978
SBE3
Starch branching enzyme (747 aa)
   
 
  0.973
SBE1
Starch branching enzyme (690 aa)
   
 
  0.973
SBE2
Starch branching enzyme (788 aa)
   
 
  0.972
AMYB3
Beta-amylase (399 aa)
         
  0.903
AMYB1
Beta-amylase (594 aa)
         
  0.903
AMYB2
Beta-amylase (395 aa)
         
    0.900
EDP06988
Predicted protein (235 aa)
       
 
  0.829
TIG1
Chloroplast trigger factor (548 aa)
       
 
  0.825
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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