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EDP02643 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP02643" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP02643Predicted protein (117 aa)    
Predicted Functional Partners:
LHL4
High intensity light-inducible lhc-like gene (285 aa)
     
        0.669
EDP07284
Predicted protein (151 aa)
     
     
0.657
CGLD4
Predicted protein (310 aa)
     
        0.656
EDP07285
Predicted protein (151 aa)
     
     
0.633
EDO97417
Predicted protein (223 aa)
     
        0.548
EDP08684
Solanesyl diphosphate synthase (394 aa)
     
        0.428
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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