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ARP6 protein (Chlamydomonas reinhardtii) - STRING interaction network
"ARP6" - Actin-related protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARP6Actin-related protein (92 aa)    
Predicted Functional Partners:
ASF1
Anti-silencing factor (225 aa)
           
  0.730
SEC12
Regulator of COP-II vesicle coat (471 aa)
           
  0.706
PRP4
Splicing factor, component of the U4/U6-U5 snRNP complex (350 aa)
     
        0.512
EDP00856
Predicted protein (456 aa)
     
        0.505
EDP06511
Predicted protein (148 aa)
     
        0.502
EDP08129
PAN3-like protein (285 aa)
     
        0.479
EDP04475
Predicted protein (617 aa)
     
        0.477
DEGO
DegP-type protease-like protein (632 aa)
     
        0.477
EDO98876
Predicted protein (300 aa)
     
        0.475
GTR21
Glycosyl transferase, type ALG6, ALG8 (582 aa)
     
        0.459
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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