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RPPK1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RPPK1" - Ribose-phosphate pyrophosphokinase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPPK1Ribose-phosphate pyrophosphokinase (424 aa)    
Predicted Functional Partners:
PYR5
Uridine 5’-monophosphate synthase (474 aa)
   
 
  0.968
EDO97893
Predicted protein (278 aa)
   
  0.955
RPI2
Ribose-5 phosphate isomerase-related protein (291 aa)
   
 
  0.938
RPI1
Ribose-5-phosphate isomerase (269 aa)
   
 
  0.936
TRK1
Transketolase (718 aa)
     
 
  0.931
EDP06518
PfkB-type carbohydrate kinase (333 aa)
     
  0.916
EDP01610
MutT/NUDIX hydrolase (277 aa)
       
  0.912
GPM2
Phosphoglucomutase (583 aa)
   
 
  0.910
GPM1a
Phosphoglucomutase (600 aa)
         
  0.904
EDO99727
Predicted protein (149 aa)
   
 
    0.902
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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