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ASF1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"ASF1" - Anti-silencing factor in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASF1Anti-silencing factor (225 aa)    
Predicted Functional Partners:
EDP08782
Histone transcription regulator HIRA (1042 aa)
     
  0.989
EDP00337
Predicted protein (178 aa)
     
 
  0.974
EDO96668
Predicted protein (205 aa)
     
 
  0.941
MCM2
Minichromosome maintenance protein 2 (887 aa)
     
 
  0.937
EDP04331
Histone acetyltransferase, type b catalytic subunit (444 aa)
     
 
  0.937
HTV1
Histone H3 variant (105 aa)
     
 
  0.933
EDP00599
Nucleosome remodeling factor (418 aa)
     
 
  0.933
HTV3
Histone H3 variant (156 aa)
     
 
  0.931
HTV2
Histone H3 variant (97 aa)
     
 
  0.929
EDP06512
TafII-250 protein (625 aa)
       
 
  0.928
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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