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ATF1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"ATF1" - Glucosamine--fructose-6-phosphate aminotransferase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATF1Glucosamine--fructose-6-phosphate aminotransferase (679 aa)    
Predicted Functional Partners:
CMPL1
Carbamoyl phosphate synthase, large subunit (1075 aa)
   
  0.966
CMPS1
Carbamoyl phosphate synthase, small subunit (461 aa)
   
  0.960
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
   
  0.958
SHKD1
Dehydroquinate dehydratase (554 aa)
     
 
  0.953
NAT2
N-acetyltransferase (148 aa)
     
  0.946
PGI1
Phosphoglucose isomerase (646 aa)
   
 
  0.945
MPI1
Mannose-6-phosphate isomerase (365 aa)
     
 
  0.943
EDO97893
Predicted protein (278 aa)
       
  0.933
GLN1
Glutamine synthetase (382 aa)
   
 
  0.932
GLN2
Glutamine synthetase (380 aa)
   
 
  0.932
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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