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CCB4 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CCB4" - CGLD23 protein required for cyt b6 assembly in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCB4CGLD23 protein required for cyt b6 assembly (306 aa)    
Predicted Functional Partners:
CCB3
CPLD43 protein required for cyt b6 assembly (193 aa)
   
   
  0.914
CCB2
Protein required for cyt b6 assembly (310 aa)
   
   
  0.883
CCB1
CPLD51 protein required for cyt b6 assembly (269 aa)
     
   
  0.872
CCS1
C-type cytochrome synthesis 1; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment (398 aa)
 
   
  0.751
PPR3
Protein with PPR repeats (160 aa)
     
   
  0.610
CPLD36
Predicted protein (196 aa)
   
        0.564
PSAL
Photosystem I reaction center subunit XI (196 aa)
   
          0.516
TAB2
PsaB RNA binding protein (358 aa)
   
        0.512
CGLD27
Predicted protein (283 aa)
   
          0.499
CGL70
Predicted protein (448 aa)
   
        0.492
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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