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PUF3 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PUF3" - Puf protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUF3Puf protein (273 aa)    
Predicted Functional Partners:
RPPK2
Ribose-phosphate pyrophosphokinase (398 aa)
     
 
  0.812
RPPK1
Ribose-phosphate pyrophosphokinase (424 aa)
       
 
  0.804
EDO98668
Oxysterol binding protein (463 aa)
       
 
  0.804
CAF1
CCR4-associated factor (300 aa)
       
 
  0.758
VPS9
Guanine nucleotide exchange factor (495 aa)
     
 
  0.701
RPS15
Ribosomal protein S15 (145 aa)
     
      0.673
RPL27a
Ribosomal protein L27a (147 aa)
       
      0.673
RPL29
Ribosomal protein L29 (54 aa)
       
      0.673
RPL32
Ribosomal protein L32 (133 aa)
       
      0.673
EDO99634
Predicted protein (366 aa)
       
      0.673
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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