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DXR1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"DXR1" - 1-deoxy-D-xylulose 5-phosphate reductoisomerase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DXR11-deoxy-D-xylulose 5-phosphate reductoisomerase (415 aa)    
Predicted Functional Partners:
DXS1
1-deoxy-D-xylulose 5-phosphate synthase (708 aa)
 
 
  0.992
CMS
4-diphosphocytidyl-2C-methyl-D-erythritol synthase (319 aa)
 
  0.990
HDS1
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (681 aa)
 
   
  0.952
IDS1
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (465 aa)
 
   
  0.941
EDP05431
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (207 aa)
 
  0.903
EDO99516
Carotenoid isomerase (568 aa)
     
   
  0.788
EDO95991
Predicted protein (79 aa)
 
  0.787
GGPS
Geranylgeranyl diphosphate synthase (345 aa)
   
   
  0.769
PDS1
Phytoene desaturase (564 aa)
     
   
  0.759
CMK1
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (347 aa)
   
   
  0.740
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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