STRINGSTRING
EDP02979 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP02979" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP02979Predicted protein (194 aa)    
Predicted Functional Partners:
CPLD36
Predicted protein (196 aa)
 
   
  0.602
CGLD27
Predicted protein (283 aa)
   
          0.522
CPLD20
Predicted protein (443 aa)
   
          0.520
APE1
Predicted protein (276 aa)
   
        0.515
EDP08112
SOUL3-like protein (232 aa)
   
        0.500
GUN4
Tetrapyrrole-binding protein (260 aa)
   
          0.490
EDP09189
Tocopherol cyclase (442 aa)
   
          0.487
CGLD29
Predicted protein (269 aa)
   
        0.485
PSBP5
Thylakoid-anchored PsbP-like protein (318 aa)
   
        0.485
TEF9
Predicted protein (258 aa)
   
        0.484
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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