STRINGSTRING
EDP03004 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03004" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03004Predicted protein (593 aa)    
Predicted Functional Partners:
EDP09044
Predicted protein (1037 aa)
     
        0.516
EDO95808
Predicted protein (218 aa)
     
        0.493
EDO96692
Predicted protein (374 aa)
     
        0.485
EDP07612
Predicted protein (308 aa)
     
        0.455
EDP01334
Predicted protein (575 aa)
     
        0.449
EDP01332
Predicted protein (390 aa)
     
        0.424
EDP08951
Predicted protein (886 aa)
     
        0.422
EDO99620
Predicted protein (1127 aa)
     
        0.415
CLR16
Predicted protein of CLR family (1225 aa)
     
        0.409
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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