STRINGSTRING
SRP9 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SRP9" - Subunit of the signal recognition particle in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRP9Subunit of the signal recognition particle (110 aa)    
Predicted Functional Partners:
SRP14
Subunit of the signal recognition particle (98 aa)
     
  0.991
SRP54
Subunit of the signal recognition particle (503 aa)
     
  0.977
EDP00260
Chloroplast SRP54 subunit of signal recognition particle (549 aa)
     
  0.977
SRP68
Subunit of the signal recognition particle (699 aa)
     
  0.969
SRP72
Subunit of the signal recognition particle (746 aa)
     
 
  0.861
EIF4E
Eukaryotic initiation factor (202 aa)
     
   
  0.835
SRP19
Subunit of the signal recognition particle (143 aa)
     
 
  0.831
EIF4G
Eukaryotic initiation factor (797 aa)
     
 
  0.796
FTX1
Frataxin (217 aa)
           
  0.712
EDP08434
poly(A) binding protein (136 aa)
     
   
  0.671
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (7%) [HD]