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EDP03083 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03083" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03083Predicted protein (188 aa)    
Predicted Functional Partners:
NUP155
Nuclear pore protein (868 aa)
     
  0.975
EDO96335
Predicted protein (540 aa)
     
  0.932
SEC13L
COP-II coat subunit, nucleoporin (338 aa)
     
  0.888
EDP02867
Predicted protein (450 aa)
     
  0.870
EDP06719
Predicted protein (151 aa)
     
  0.778
UBC3
E2 ubiquitin-conjugating enzyme (163 aa)
     
    0.766
EDP09237
Predicted protein (192 aa)
     
    0.760
UBC4
E2 ubiquitin-conjugating-like enzyme (159 aa)
     
    0.760
EDP02477
RAN binding protein, RANBP1 (133 aa)
     
  0.759
EDP01555
Predicted protein (662 aa)
     
  0.751
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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