STRINGSTRING
EDP03124 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03124" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03124Predicted protein (3884 aa)    
Predicted Functional Partners:
EDO97268
Predicted protein (2131 aa)
     
        0.653
CAV8
Voltage-gated Ca2+ channel, alpha subunit (4695 aa)
     
        0.650
EDP06283
Predicted protein (1038 aa)
     
        0.634
EDP04802
Predicted protein (2595 aa)
     
        0.611
EDP05936
chromodomain-helicase-DNA-binding protein (1219 aa)
     
        0.549
EDP07343
Predicted protein (1973 aa)
     
        0.524
EDP03377
Predicted protein (2904 aa)
     
        0.523
EDP01323
Predicted protein (1479 aa)
     
        0.522
EDP05847
Predicted protein (2386 aa)
     
        0.521
EDP03227
Predicted protein (5080 aa)
     
     
0.517
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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