STRINGSTRING
EDP03139 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03139" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03139Predicted protein (404 aa)    
Predicted Functional Partners:
EDP01097
Predicted protein (181 aa)
     
      0.983
EDP00663
Predicted protein; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (179 aa)
     
        0.855
EDP08746
Predicted protein (204 aa)
     
        0.836
EDP00039
Predicted protein (174 aa)
     
   
  0.827
EDP09248
Predicted protein (211 aa)
     
        0.799
EDP04107
Predicted protein (309 aa)
     
      0.789
NOP58
Nucleolar protein, component of C/D snoRNPs (508 aa)
     
 
  0.775
EDP03165
Predicted protein (330 aa)
     
      0.763
EDP07846
Predicted protein (286 aa)
     
      0.761
EDP06674
Predicted protein (216 aa)
     
        0.745
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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