STRINGSTRING
AGL1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"AGL1" - Alpha glucosidase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGL1Alpha glucosidase (1059 aa)    
Predicted Functional Partners:
HXK1
Hexokinase (658 aa)
         
  0.912
AGA1
Alpha-galactosidase (328 aa)
       
  0.905
EDP05544
Predicted protein (309 aa)
     
 
  0.904
SIP1
Raffinose synthase (898 aa)
       
    0.900
AMYB3
Beta-amylase (399 aa)
         
    0.900
AMYB2
Beta-amylase (395 aa)
         
    0.900
AMYB1
Beta-amylase (594 aa)
         
    0.900
EDP00408
Predicted protein (81 aa)
     
  0.896
EDP00407
Predicted protein (92 aa)
     
  0.896
DPE1
4-alpha-glucanotransferase (941 aa)
   
 
  0.879
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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