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EDP03159 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03159" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03159Predicted protein (190 aa)    
Predicted Functional Partners:
PRPS20
Plastid ribosomal protein S20 (166 aa)
     
        0.476
CPN11
Chaperonin 11 (128 aa)
     
        0.471
CGL20
Predicted protein (146 aa)
     
        0.445
PRPL18
Plastid ribosomal protein L18 (145 aa)
     
        0.424
PRPS13
Plastid ribosomal protein S13 (164 aa)
     
        0.422
TIG1
Chloroplast trigger factor (548 aa)
     
        0.419
PRPL15
Plastid ribosomal protein L15 (241 aa)
     
        0.418
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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