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DEGO protein (Chlamydomonas reinhardtii) - STRING interaction network
"DEGO" - DegP-type protease-like protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEGODegP-type protease-like protein (632 aa)    
Predicted Functional Partners:
RPN3
26S proteasome regulatory subunit (488 aa)
     
    0.784
RPN6
26S proteasome regulatory subunit (421 aa)
     
    0.747
EDP03665
Predicted protein (400 aa)
       
  0.745
CSN2
COP9 signalosome subunit (437 aa)
     
    0.737
EDP08752
Predicted protein (366 aa)
     
        0.670
EDO98194
Predicted protein (358 aa)
     
        0.665
EDO98475
Predicted protein (1008 aa)
   
  0.664
EDP05633
Predicted protein (879 aa)
     
        0.660
RPT2
26S proteasome regulatory subunit (443 aa)
       
  0.657
RPT5
26S proteasome regulatory subunit (428 aa)
       
  0.657
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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