STRINGSTRING
EDP03250 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03250" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03250Predicted protein (803 aa)    
Predicted Functional Partners:
SMC5B
Structural maintenance of chromosomes protein 5B (1124 aa)
     
        0.707
EDP04004
Predicted protein (1256 aa)
     
        0.706
EDP03175
Histone methyltransferase (1708 aa)
     
        0.699
EDP02506
ATP-dependent DNA helicase (897 aa)
     
        0.699
EDP03406
Predicted protein (594 aa)
     
        0.698
EDP07451
Predicted protein (746 aa)
     
        0.689
EDO97452
Hypothetical protein (136 aa)
     
        0.687
EDP02224
Predicted protein (1294 aa)
     
        0.686
EDP04084
Predicted protein (1377 aa)
     
        0.683
SMC2
Structural maintenance of chromosomes protein 2 (1165 aa)
     
        0.682
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (15%) [HD]