STRINGSTRING
RAD50 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RAD50" - DNA repair protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD50DNA repair protein (1410 aa)    
Predicted Functional Partners:
MRE11
MRE11 eukaryotic DNA repair protein (163 aa)
   
  0.998
EDO98953
DNA binding protein (661 aa)
     
  0.964
ATR1
DNA damage-sensing protein kinase (3304 aa)
     
  0.960
RAD17
DNA damage checkpoint protein (1026 aa)
     
  0.958
RPA70A
Replication protein A, 70 kDa DNA-binding subunit (451 aa)
     
  0.956
SMC3
Structural maintenance of chromosomes protein 3 (1121 aa)
   
  0.947
RAD51
DNA recombination protein (343 aa)
   
  0.943
EDO97259
Predicted protein (294 aa)
   
  0.941
ATM1
DNA damage signaling kinase, ATM/TEL1-related (950 aa)
     
  0.923
RECA
Chloroplast RecA recombination protein (415 aa)
   
  0.923
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (9%) [HD]