STRINGSTRING
EDP03285 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03285" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03285Predicted protein (445 aa)    
Predicted Functional Partners:
HYDEF
Iron hydrogenase assembly protein (1151 aa)
         
  0.677
EDO99800
Predicted protein (116 aa)
   
 
  0.660
SPT1
Component of serine palmitoyltransferase (435 aa)
     
  0.633
BIOF
7-keto-8-aminopelargonic acid synthase (328 aa)
     
  0.633
SPT2
Serine palmitoyltransferase (333 aa)
     
  0.633
GPM2
Phosphoglucomutase (583 aa)
   
   
  0.606
EDO99801
Predicted protein (147 aa)
       
  0.578
EDO95943
Predicted protein (92 aa)
       
  0.556
CYP740A1
Cytochrome P450, CYP85 clan (556 aa)
     
 
  0.534
EDP01883
Predicted protein (351 aa)
     
   
  0.530
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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