STRINGSTRING
EDP03306 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03306" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03306Predicted protein (1104 aa)    
Predicted Functional Partners:
CGL46
Predicted protein (1140 aa)
     
        0.673
EDO99850
Predicted protein (1001 aa)
     
        0.671
EDP00964
Predicted protein (1253 aa)
     
        0.668
EDP10002
Predicted protein (1021 aa)
     
        0.667
EDP00281
Predicted protein (609 aa)
     
        0.659
EDP04235
Predicted protein (662 aa)
     
        0.657
VFL1
Variable flagella protein 1 (1216 aa)
     
        0.657
EDO99654
Predicted protein (760 aa)
     
        0.653
EDP04084
Predicted protein (1377 aa)
     
        0.652
EDO97700
Predicted protein (1602 aa)
     
        0.650
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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